Madson A. de Luna-AragãoVirtual development lab

delunalab.dev

A virtual lab dedicated to building toolsEach project here is an experiment at the boundary of artificial intelligence, autonomous systems, bioinformatics, and production software.

Launched

BioHub

Centralized portal for biological data integration, search, and exploration across multiple omics layers.

webpythonjavascripthtmlcss

Launched

AMPidentifier

Machine learning classifier for antimicrobial peptide identification from amino acid sequences.

cliwebpippythonscikit-learnbashhtmljavascriptcssdocker

Under development

decryptAMP

Computational pipeline to mine proteomes for encrypted antimicrobial peptides that exist latently within larger protein sequences.

clipippythonscikit-learnbashdocker

Under development

AMPcraft

AI-guided AMP discovery pipeline with ESM-2 classifiers, sequence generation, and ESMFold structure prediction.

clipythontensorflowbashdocker

Beta testing

BILBO

Builds flat lipid bilayer membranes from all-atom PDB templates and places proteins or peptides on or inside them for MD preparation.

cliwebpythonbashdocker

Portfolio

More projects on GitHub

All public repositories, scripts, and tools developed for bioinformatics research and software projects.

cliapiwebpythonrbashnextflowtypescripttensorflowdocker